Input

Note

Only the first FASTA entry is processed per file (by design).

Input Format

• Input files must be in standard FASTA format.
• Only the first sequence per file is read.
• FASTA headers (lines starting with '>') are skipped automatically.

Example:

For DNA sequences, use the following format:

>sequence1
AGCTAGCTAGCTA
>sequence2 
GCTAGCTAGCTAG

For protein sequences, use the following format:

>protein1
MKTAYIAKQRQISFVKSHFSRQDILDL
>protein2
MKTAAYIAKQRQISFVKSHFSRQDILDL

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Test Files

Located in the files/ directory:

• dna1.fasta: Contains DNA sequences for testing.
• protein1.fasta: Contains protein sequences for testing.
• dna2.fasta: Contains DNA sequences for testing.
• protein2.fasta: Contains protein sequences for testing.