AlignmentResult Struct Reference

Data Fields
std::string	aligned_seq1
std::string	aligned_seq2
int	score = 0
long long	time_ms = 0
int	query_start_orig = -1
int	query_end_orig = -1
int	target_start_orig = -1
int	target_end_orig = -1

Field Documentation

aligned_seq1

std::string AlignmentResult::aligned_seq1

aligned_seq2

std::string AlignmentResult::aligned_seq2

query_end_orig

int AlignmentResult::query_end_orig = -1

query_start_orig

int AlignmentResult::query_start_orig = -1

score

int AlignmentResult::score = 0

target_end_orig

int AlignmentResult::target_end_orig = -1

target_start_orig

int AlignmentResult::target_start_orig = -1

time_ms

long long AlignmentResult::time_ms = 0

---

The documentation for this struct was generated from the following file:

• src/main_fmindex.cpp