PhosKinTime
A Python package for analyzing phosphoproteomics data, including time-course analysis and visualization.
SARS-CoV-2 lineage reconstruction
A Nextflow-powered Pipeline for SARS-CoV-2 genome reconstruction using state-of-the-art bioinformatics tools.
GRmap
A Snakemake pipeline for matching sequencing reads to a reference genome and annotating genomic features.
CodonAnalyzer
A Snakemake workflow for codon usage analysis, GC content calculation, and protein hydropathy profiling.
SequenceAligner
Accelerated sequence alignment using SIMD and MPI for scalable, distributed analysis.
GitHub
Liver Prediction (LIHC)
ML-based classification of liver cancer tissues with transcriptomic & epigenomic analysis.
GitHub